Mini Cheesecake Stuffed Cookie Cups Recipe

Cheesecake Cookie Cups are the perfect combination of two beloved desserts: creamy cheesecake and soft, chewy cookies. These bite-sized treats start with refrigerated cookie dough for an easy base and are filled with a light Nutella cheesecake filling. A final drizzle of caramel and chocolate makes them look gourmet while keeping the process simple. They’re great for parties, potlucks, or whenever you want a quick homemade dessert that impresses.

Cheesecake Cookie Cups on a plate.

I brought a batch of these to a get-together and they disappeared within minutes. Guests assumed they were from a bakery—an easy sign of a crowd-pleasing recipe. Because they’re small and portable, they’re ideal for serving a crowd without a lot of fuss.

Make them ahead and chill until serving, or keep a few in the fridge for quick sweet bites during the week.

Why You’ll Love This Recipe

  • Two desserts in one: cookie and cheesecake in one small package—lots of flavor in a single bite.
  • Quick and easy: Use store-bought refrigerated cookie dough and a simple whipped filling to save time.
  • Perfect portions: Mini muffin–sized cups make portioning simple and give a pretty presentation for gatherings.
  • Customizable: Top with caramel, chocolate, nuts, sprinkles, or fresh berries to suit the occasion.
  • Make-ahead friendly: Prepare in advance and refrigerate until you’re ready to serve.

Ingredients

Printable recipe measurements and full instructions are included in the recipe section below.

  • 1 package refrigerated cookie dough (chocolate chip recommended)
  • 1 (8 oz / 250 g) package cream cheese, room temperature
  • 4 tbsp powdered sugar
  • 2 tbsp Nutella (or your preferred chocolate-hazelnut spread)
  • Caramel topping, as desired
  • Chocolate topping, as desired
Ingredients on a white marble counter.

How to Make Cheesecake Cookie Cups

  1. Preheat: Heat the oven according to the cookie dough package directions.
  2. Form the cups: Slice the refrigerated cookie dough and press each slice into a well-greased mini muffin tin, shaping a small cup. Bake about 7 minutes, until the dough starts to set and rise.
  3. Create the well: Remove the pan from the oven while the cups are rising. Use a small spoon or a greased shot glass to press the centers down gently, leaving the sides intact. Return to the oven and bake another 5 minutes.
  4. Repeat and finish: Remove again, press the centers down once more, then bake until golden brown. Allow the cookie cups to cool completely in the pan.
  5. Make the filling: In a bowl, beat room-temperature cream cheese, powdered sugar, and Nutella with an electric mixer until light and fluffy.
  6. Fill the cups: Transfer the cheesecake mixture to a piping bag (or use a zip-top bag with the corner snipped) and pipe into the cooled cookie cups. Chill in the refrigerator to set.
  7. Finish and serve: When ready to serve, drizzle with caramel and chocolate toppings. Add a sprinkle of chopped nuts or a fresh berry if desired.
Collage of making the cookie cups.

What to Serve With Them

  • Coffee or espresso: The rich filling pairs beautifully with a hot coffee.
  • Fresh berries: Strawberries, raspberries, or blueberries add brightness and balance the sweetness.
  • Vanilla ice cream: Serve a few slightly warm cookie cups alongside a scoop for an indulgent dessert.
  • Dessert platter: Include them on a tray with brownies, fudge, or mini tarts for variety.
  • Milk: Classic and kid-friendly—cookies and milk are always a hit.
The recipe on a platter.

Variations and Substitutions

  • Dairy-free: Use plant-based cream cheese and dairy-free cookie dough.
  • Different cookie bases: Swap in sugar cookie, peanut butter, or double chocolate dough.
  • Alternate spreads: Use peanut butter, Biscoff, or a fruit jam instead of Nutella.
  • Crunchy toppings: Add chopped nuts, crushed pretzels, or toffee bits for texture.
  • Fruity finish: Top with a fresh raspberry or strawberry slice instead of chocolate drizzle for a lighter option.
The recipe with a bite out of it.

Storage Instructions

  • Refrigerate: Store leftovers in an airtight container in the refrigerator for 3–4 days.
  • Avoid stacking: If layering, place parchment between layers to prevent sticking or squashing the filling.
  • Serve chilled or warmed: They’re tasty straight from the fridge; for a softer filling, let them sit at room temperature 10–15 minutes.
  • Freezing: Freeze single-layer in an airtight container for up to 2 months. Thaw overnight in the fridge before serving.
The recipe on a platter.

Recipe Tips and Tricks

  • Grease the tin well: Even with a nonstick pan, a light coating of spray or butter helps the cups release cleanly.
  • Double press: Press the centers down twice during baking to create a stable well for filling.
  • Use room-temperature cream cheese: This prevents lumps and ensures a smooth, fluffy filling.
  • Pipe the filling: A piping bag gives a polished look, but a spoon works fine for a more rustic finish.
  • Drizzle just before serving: Add sauces right before plating so they stay glossy and fresh.

Recipe

Gooey Cheesecake Cookie Cups (Makes about 18)

Prep time: 15 minutes | Cook time: 17 minutes | Total: 32 minutes

Ingredients

  • 1 package refrigerated cookie dough (about 18-count when sliced)
  • 1 (8 oz / 250 g) package cream cheese, room temperature
  • 4 tbsp powdered sugar
  • 2 tbsp Nutella
  • Caramel topping, as desired
  • Chocolate topping, as desired

Instructions

  1. Preheat the oven according to the cookie dough package directions.
  2. Slice cookie dough and press each piece into a greased mini muffin pan to form cups. Bake about 7 minutes until beginning to set.
  3. Remove the pan and press the centers down gently with a small spoon or greased shot glass. Return to oven and bake 5 more minutes.
  4. Remove and press centers again, then bake until golden brown. Cool completely in the pan.
  5. Beat cream cheese, powdered sugar, and Nutella until light and fluffy. Transfer the filling to a piping bag.
  6. Pipe filling into cooled cookie cups and chill until firm.
  7. Before serving, drizzle caramel and chocolate over the tops. Garnish as desired.

Notes

  • Softened cream cheese blends best—avoid using it straight from the fridge.
  • Try different cookie dough flavors to change the overall profile of the cups.
  • Ensure cups are fully cooled before filling to prevent the filling from melting.
  • Best the same day, but refrigerate leftovers up to 3–4 days.

Nutrition (estimated per serving)

Calories: 55 kcal | Carbohydrates: 6 g | Protein: 1 g | Fat: 3 g | Saturated Fat: 2 g | Sugar: 5 g